Implications of HIV-1 M group polymorphisms on intergase inhibitor efficacy and resistance: genetic and structural in-silico analyses

Article

Loizidou, E., Kousiappa, I., Zeinalipour-Yazdi, C., Van De Vijver, D. and Kostrikis, L. 2009. Implications of HIV-1 M group polymorphisms on intergase inhibitor efficacy and resistance: genetic and structural in-silico analyses. Biochemistry. 48 (1), pp. 4-6. https://doi.org/10.1021/bi8019349
TypeArticle
TitleImplications of HIV-1 M group polymorphisms on intergase inhibitor efficacy and resistance: genetic and structural in-silico analyses
AuthorsLoizidou, E., Kousiappa, I., Zeinalipour-Yazdi, C., Van De Vijver, D. and Kostrikis, L.
Abstract

The extensive polymorphisms among HIV-1 subtypes have been implicated in drug resistance development. Integrase inhibitors represent the latest addition to the treatment of HIV-1, and their efficacy and resistance patterns among M group strains are currently under investigation. This study analyzed the intersubtype variation within 108 integrase sequences from seven subtypes. The residues associated with catalytic activity and primary resistance to raltegravir were highly conserved among all strains. Variations were observed in residues associated with secondary resistance. Molecular modeling studies indicated a two-way binding mode of raltegravir that explains the resistance pathways and the implication of nonconservative mutations in integrase−raltegravir interactions.

PublisherAmerican Chemical Society (ACS)
JournalBiochemistry
ISSN0006-2960
Publication dates
Print13 Jan 2009
Publication process dates
Deposited06 Mar 2015
Output statusPublished
Additional information

Publication Date (Web): December 17, 2008 (Rapid Report)

Digital Object Identifier (DOI)https://doi.org/10.1021/bi8019349
LanguageEnglish
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