Genetic sequences: tracing the mutations of a disease.

Conference poster

Mitchell, I., Passmore, P. and Xu, K. 2010. Genetic sequences: tracing the mutations of a disease. IEEE VAST Symposium 2010 Challenge. Salt Lake City, Utah, USA 24 - 29 Oct 2010
TypeConference poster
TitleGenetic sequences: tracing the mutations of a disease.
AuthorsMitchell, I., Passmore, P. and Xu, K.
Abstract

The entry is to address the mini challenge 3 in the IEEE VAST Challenge 2010. A patient, identified by Interpol as Nicolai Kuryakin, is admitted to a hospital in Paris after being removed from a flight to Moscow due to illness. The patient, now deceased, was admitted with an unidentified illness and later developed symptoms consistent with Drafa Fever. An autopsy confirmed the presence of the Drafa virus in the patient’s bloodstream. Visual analytics methods are applied to help to understand the evolution of the current Drafa virus outbreak, as it may shed some light on Nicolai’s contacts.

Research GroupArtificial Intelligence group
ConferenceIEEE VAST Symposium 2010 Challenge
Publication process dates
Deposited21 Feb 2011
Output statusPublished
LanguageEnglish
File
Permalink -

https://repository.mdx.ac.uk/item/831xw

Log in to edit

Download files

  • 50
    total views
  • 14
    total downloads
  • 3
    views this month
  • 1
    downloads this month

Export as

Related outputs

CAGE: Consensus Algorithm Genetically Enhanced
Mitchell, I. and Maka, K. 2023. CAGE: Consensus Algorithm Genetically Enhanced. 15th International Conference on Global Security, Safety & Sustainability. Virtual Online 11 - 12 Oct 2023 Springer.
IoT and cloud forensic investigation guidelines
Mitchell, I., Hara, S., Ibarra-Jiminez, J., Jahankhani, H. and Montasari, R. 2020. IoT and cloud forensic investigation guidelines. in: Jahankhani, H., Akhgar, B., Cochrane, P. and Dastbaz, M. (ed.) Policing in the Era of AI and Smart Societies Cham, Switzerland Springer. pp. 119-138
dAppER: decentralised application for examination reviews
Mitchell, I., Hara, S. and Sheriff, M. 2019. dAppER: decentralised application for examination reviews. 12th International Conference on Global Security, Safety & Sustainability. Northumbria University London, England 16 - 18 Jan 2019 IEEE. https://doi.org/10.1109/ICGS3.2019.8688143
Blockchain of custody, BoC
Mitchell, I., Hara, S., Jahankhani, H. and Neilson, D. 2020. Blockchain of custody, BoC. in: Jahankhani, H. (ed.) Cyber Security Practitioner's Guide World Scientific Publishing Co. Pte Ltd. pp. 365-397
BMAR - blockchain for medication administration records
Mitchell, I. and Hara, S. 2019. BMAR - blockchain for medication administration records. in: Jahankhani, H., Kendzierskyj, S., Jamal, A., Epiphaniou, G. and Al-Khateeb, H. (ed.) Blockchain and Clinical Trial: Securing Patient Data Cham, Switzerland Springer.
Patterns of life visualisations for intelligence analysis: exploring animation with POLAR
Attfield, S., Selvaraj, N., Kodagoda, N., Passmore, P. and Duncker-Gassen, E. 2019. Patterns of life visualisations for intelligence analysis: exploring animation with POLAR. 2019 International Carnahan Conference on Security Technology (ICCST). Chennai, India 01 - 03 Oct 2019 IEEE. pp. 1-6 https://doi.org/10.1109/CCST.2019.8888410
UX evaluation of VR locomotion & virtual object interaction mechanics
Wiedemann, D., Passmore, P. and Moar, M. 2020. UX evaluation of VR locomotion & virtual object interaction mechanics. Geril, P. and Polanska, M. (ed.) SciFi-It’2020 the 4th International Science Fiction Prototyping Conference. University of Leuven Campus Ghent, Ghent, Belgium 07 - 09 Sep 2020 EUROSIS. pp. 49-57
Quality audits with Blockchain for healthcare in the UK
Mitchell, I. and Hara, S. 2019. Quality audits with Blockchain for healthcare in the UK. George, C., Whitehouse, D. and Duquenoy, P. (ed.) Health IT Workshop 2019. Middlesex University, London 07 - 08 Nov 2019 pp. 42-43
“VRification”: applying virtual reality to digital games
Wiedemann, D., Passmore, P. and Moar, M. 2017. “VRification”: applying virtual reality to digital games. SciFi-It'2017: International Science Fiction Prototyping Conference. Bruges, Belgium 10 - 11 Apr 2017 EUROSIS. pp. 55-58
An experiment design: investigating VR locomotion & virtual object interaction mechanics
Wiedemann, D., Passmore, P. and Moar, M. 2017. An experiment design: investigating VR locomotion & virtual object interaction mechanics. GAME-ON'2017: 18th International Conference on Intelligent Games and Simulation. Carlow, Ireland 06 - 08 Sep 2017 EUROSIS. pp. 80-86
DaP∀ : Deconstruct and Preserve for all: a procedure for the preservation of digital evidence on solid state drives and traditional storage media
Mitchell, I., Ferriera, J., Anandaraja, T. and Hara, S. 2018. DaP∀ : Deconstruct and Preserve for all: a procedure for the preservation of digital evidence on solid state drives and traditional storage media. in: Jahankhani, H. (ed.) Cyber Criminology Cham, Switzerland Springer. pp. 275-281
Virtual Reality 3rd person camera behavior modes
Wiedemann, D., Passmore, P. and Moar, M. 2016. Virtual Reality 3rd person camera behavior modes. GAME-ON'2016: 17th International Conference on Intelligent Games and Simulation. Lisbon, Portugal 13 - 15 Sep 2016 EUROSIS. pp. 57-64
Local multiplayer immersion affected by 3D stereoscopy
Wiedemann, D., Passmore, P. and Moar, M. 2017. Local multiplayer immersion affected by 3D stereoscopy. CHI PLAY 2017. Amsterdam 15 - 18 Oct 2017 Association for Computing Machinery (ACM). pp. 25-35 https://doi.org/10.1145/3130859.3131429
SMERF: Social Media, Ethics and Risk Framework
Mitchell, I., Cockerton, T., Hara, S. and Evans, C. 2018. SMERF: Social Media, Ethics and Risk Framework. in: Jahankhani, H. (ed.) Cyber Criminology Cham, Switzerland Springer. pp. 203-225
How can we design tactile interactive software for argument construction in criminal intelligence analysis?
Groenewald, C., Wong, B., Attfield, S., Passmore, P. and Kodagoda, N. 2017. How can we design tactile interactive software for argument construction in criminal intelligence analysis? Gore, J. and Ward, P. (ed.) 13th Bi-annual International Conference on Naturalistic Decision Making (NDM13). University of Bath, Bath, United Kingdom 20 - 23 Jun 2017 The University of Bath. pp. 322-328
How analysts think: how do criminal intelligence analysts recognise and manage significant information?
Groenewald, C., Wong, B., Attfield, S., Passmore, P. and Kodagoda, N. 2017. How analysts think: how do criminal intelligence analysts recognise and manage significant information? 2017 European Intelligence and Security Informatics Conference (EISIC 2017). Athens, Greece 11 - 13 Sep 2017 Institute of Electrical and Electronics Engineers (IEEE). pp. 47-53 https://doi.org/10.1109/EISIC.2017.15
How analysts think: navigating uncertainty – aspirations, considerations and strategies
Groenewald, C., Wong, B., Attfield, S., Passmore, P. and Kodagoda, N. 2017. How analysts think: navigating uncertainty – aspirations, considerations and strategies. Gore, J. and Ward, P. (ed.) 13th Bi-annual International Conference on Naturalistic Decision Making (NDM13). University of Bath, Bath, United Kingdom 20 - 23 Jun 2017 The University of Bath. pp. 56-64
How analysts think: think-steps as a tool for structuring sensemaking in criminal intelligence analysis
Selvaraj, N., Attfield, S., Passmore, P. and Wong, B. 2016. How analysts think: think-steps as a tool for structuring sensemaking in criminal intelligence analysis. 2016 European Intelligence and Security Informatics Conference (EISIC). Uppsala, Sweden 17 - 19 Aug 2016 Institute of Electrical and Electronics Engineers (IEEE). pp. 68-75 https://doi.org/10.1109/EISIC.2016.019
360 Cinematic literacy: a case study
Passmore, P., Glancy, M., Philpot, A. and Fields, B. 2017. 360 Cinematic literacy: a case study. International Broadcasting Convention Conference 2017. Amsterdam 14 - 18 Sep 2017 International Broadcasting Convention.
CABots and other neural agents
Huyck, C. and Mitchell, I. 2018. CABots and other neural agents. Frontiers in Neurorobotics. 12, pp. 1-12. https://doi.org/10.3389/fnbot.2018.00079
Understanding 3D mid-air hand gestures with interactive surfaces and displays: a systematic literature review
Groenewald, C., Anslow, C., Islam, J., Rooney, C., Passmore, P. and Wong, B. 2016. Understanding 3D mid-air hand gestures with interactive surfaces and displays: a systematic literature review. HCI 2016 - Fusion! 30th International BCS Human Computer Interaction Conference (HCI 2016). Bournemouth University, Poole, United Kingdom 11 - 15 Jul 2016 British Computer Society. pp. 1-13 https://doi.org/10.14236/ewic/HCI2016.43
Addressing VAST 2016 mini challenge 2 with POLAR kermode, classifier, excel on a power wall and data timelines
Attfield, S., Hewitt, D., Xu, K., Passmore, P., Wagstaff, A., Phillips, G., Windridge, D., Dash, G., Chapman, R. and Mason, L. 2016. Addressing VAST 2016 mini challenge 2 with POLAR kermode, classifier, excel on a power wall and data timelines. IEEE VAST Challenge 2016. Baltimore, MD, USA 23 Oct 2016
Supporting the externalisation of thinking in criminal intelligence analysis
Passmore, P., Attfield, S., Kodagoda, N., Groenewald, C. and Wong, B. 2015. Supporting the externalisation of thinking in criminal intelligence analysis. European Intelligence and Security Informatics Conference (EISIC) 2015. Manchester, United Kingdom 07 - 09 Sep 2015 Institute of Electrical and Electronics Engineers (IEEE). pp. 16-23 https://doi.org/10.1109/EISIC.2015.35
Archives of thrill: the V-Armchair experience
Passmore, P., Tennent, P., Walker, B., Philpot, A., Le, H., Markowski, M. and Karamanoglu, M. 2017. Archives of thrill: the V-Armchair experience. Lindeman, R., Bruder, G. and Iwai, D. (ed.) ICAT-EGVE 2017. Adelaide, Australia 22 - 24 Nov 2017 European Association for Computer Graphics. pp. 125-132 https://doi.org/10.2312/egve.20171349
A practical, hybrid argumentation model to assist with the formulation of defensible assessments in uncertain sense-making environments
Groenewald, C., Attfield, S., Passmore, P., Wong, B. and Kodagoda, N. 2017. A practical, hybrid argumentation model to assist with the formulation of defensible assessments in uncertain sense-making environments. 2017 International Conference Next Generation Community Policing. Heraklion, Crete, Greece 25 - 27 Oct 2017
User experience of panoramic video in CAVE-like and head mounted display viewing conditions
Philpot, A., Glancy, M., Passmore, P., Wood, A. and Fields, B. 2017. User experience of panoramic video in CAVE-like and head mounted display viewing conditions. TVX '17: ACM International Conference on Interactive Experiences for TV and Online Video. Hilversum, The Netherlands 14 - 16 Jun 2017 New York, NY, USA Association for Computing Machinery (ACM). pp. 65-75 https://doi.org/10.1145/3077548.3077550
Bitcoin forensics: a tutorial
Neilson, D., Hara, S. and Mitchell, I. 2017. Bitcoin forensics: a tutorial. Jahankhani, H., Carlile, A., Emm, D., Hosseinian-Far, A., Brown, G., Sexton, G. and Jamal, A. (ed.) 11th International Conference on Global Security, Safety and Sustainability. London, UK 18 - 20 Jan 2017 Cham Springer. pp. 12-26 https://doi.org/10.1007/978-3-319-51064-4_2
Deconstruct and preserve (DaP): a method for the preservation of digital evidence on solid state drives (SSD)
Mitchell, I., Anandaraja, T., Hara, S., Hadzhinenov, G. and Neilson, D. 2017. Deconstruct and preserve (DaP): a method for the preservation of digital evidence on solid state drives (SSD). Jahankhani, H., Carlile, A., Emm, D., Hosseinian-Far, A., Brown, G., Sexton, G. and Jamal, A. (ed.) 11th International Conference on Global Security, Safety and Sustainability. London, UK 18 - 20 Jan 2017 Cham Springer. https://doi.org/10.1007/978-3-319-51064-4_1
Effects of viewing condition on user experience of panoramic video
Passmore, P., Glancy, M., Philpot, A., Roscoe, A., Wood, A. and Fields, B. 2016. Effects of viewing condition on user experience of panoramic video. Reiners, D., Iwai, D and Steinicke, F. (ed.) ICAT-EGVE 2016 - International Conference on Artificial Reality and Telexistence and Eurographics Symposium on Virtual Environments. Little Rock, Arkansas, USA. 07 - 09 Dec 2016 The Eurographics Association. https://doi.org/10.2312/egve.20161428
Programming with simulated neurons: a first design pattern
Evans, C., Mitchell, I. and Huyck, C. 2016. Programming with simulated neurons: a first design pattern. PPIG 2016 - 27th Annual Workshop of the Psychology of Programming Interest Group. University of Cambridge, Cambridge, UK 07 - 10 Sep 2016 Psychology of Programming Interest Group. pp. 36-45
PlaNeural: spiking neural networks that plan
Mitchell, I., Huyck, C. and Evans, C. 2016. PlaNeural: spiking neural networks that plan. 7th Annual International Conference on Biologically Inspired Cognitive Architectures, BICA 2016. New York City, NY, USA 16 Jul 2016 Elsevier. pp. 198-204 https://doi.org/10.1016/j.procs.2016.07.425
Self organising maps with a point neuron model
Huyck, C. and Mitchell, I. 2013. Self organising maps with a point neuron model. Intl Conf. on Cognitive and Neural Systems.
Computer forensics: challenges to evidential integrity
Mitchell, I. and Hara, S. 2014. Computer forensics: challenges to evidential integrity. in: Jennions, I. (ed.) Integrated vehicle health management: implementation and lessons learned Warrendale, PA, USA SAE International.
Exploring the challenges of implementing guidelines for the design of visual analytics systems
Haider, J., Pohl, M., Hillemann, E., Nussbaumer, A., Attfield, S., Passmore, P. and Wong, B. 2015. Exploring the challenges of implementing guidelines for the design of visual analytics systems. Human Factors and Ergonomics Society 2015 ​59th International Annual Meeting. Los Angeles, California, USA 26 - 30 Oct 2015 Human Factors and Ergonomics Society. pp. 259-263 https://doi.org/10.1177/1541931215591053
A comparison of simple agents implemented in simulated neurons
Huyck, C., Evans, C. and Mitchell, I. 2015. A comparison of simple agents implemented in simulated neurons. Biologically Inspired Cognitive Architectures. 12, pp. 9-19. https://doi.org/10.1016/j.bica.2015.03.001
A review of cell assemblies
Huyck, C. and Passmore, P. 2013. A review of cell assemblies. Biological Cybernetics. 107 (3), pp. 263-288. https://doi.org/10.1007/s00422-013-0555-5
Compensatory Hebbian learning for categorisation in simulated biological neural nets
Huyck, C. and Mitchell, I. 2013. Compensatory Hebbian learning for categorisation in simulated biological neural nets. Biologically Inspired Cognitive Architectures. 6 (5), pp. 3-7. https://doi.org/10.1016/j.bica.2013.06.003
Post and pre-compensatory Hebbian Learning for categorisation
Huyck, C. and Mitchell, I. 2014. Post and pre-compensatory Hebbian Learning for categorisation. Cognitive Neurodynamics. 8 (4), pp. 299-311. https://doi.org/10.1007/s11571-014-9282-4
A framework for digital investigations: a case study using BPB modifications
Mitchell, I. 2011. A framework for digital investigations: a case study using BPB modifications. 6th International Annual Workshop on Digital Forensics and Incident Analysis (WDFIA 2011). Kingston University, London Jul 2011
KCMAC-BYY: Kernel CMAC using Bayesian Ying-Yang learning
Tian, K., Guo, B., Liu, G., Mitchell, I., Cheng, D. and Zhao, W. 2013. KCMAC-BYY: Kernel CMAC using Bayesian Ying-Yang learning. Neurocomputing. 101, pp. 24-31. https://doi.org/10.1016/j.neucom.2012.06.028
A user study on curved edges in graph visualization
Xu, K., Rooney, C., Passmore, P., Ham, D. and Nguyen, P. 2012. A user study on curved edges in graph visualization. IEEE Transactions on Visualization and Computer Graphics. 18 (12), pp. 2449 -2456. https://doi.org/10.1109/TVCG.2012.189
Hospitalization records: characterization of pandemic spread.
Passmore, P., Zheng, Y., Rooney, C., Al-Sheikh, T. and Xu, K. 2010. Hospitalization records: characterization of pandemic spread. IEEE VAST Symposium 2010 Challenge. Salt Lake City, Utah, USA 24 - 29 Oct 2010
Integration of geographic information system and RADARSAT synthetic aperture radar data using a self-organizing map network as compensation for realtime ground data in automatic image classification
Shepherd, I., Passmore, P. and Kamal, M. 2010. Integration of geographic information system and RADARSAT synthetic aperture radar data using a self-organizing map network as compensation for realtime ground data in automatic image classification. Journal of Applied Remote Sensing. 4 (1), pp. 1-13. https://doi.org/10.1117/1.3457166
Statistical analysis for brain EIT images using SPM.
Zhang, Y., Passmore, P., Yerworth, R. and Bayford, R. 2005. Statistical analysis for brain EIT images using SPM. Institute of Electrical and Electronics Engineers. pp. 60-67 https://doi.org/10.1109/MEDIVIS.2005.17
Models of cell assembly decay
Passmore, P. and Huyck, C. 2008. Models of cell assembly decay. Institute of Electrical and Electronics Engineers. pp. 1-6 https://doi.org/10.1109/UKRICIS.2008.4798946
Visualization of multidimensional and multimodal tomographic medical imaging data, a case study
Zhang, Y., Passmore, P. and Bayford, R. 2009. Visualization of multidimensional and multimodal tomographic medical imaging data, a case study. Philosophical Transactions of the Royal Society of London. A: Mathematical and Physical Sciences. 367 (1900), pp. 3121-3148. https://doi.org/10.1098/rsta.2009.0084
Invariance of visual perception
Chikhman, V., Shelepin, Y., Foreman, N., Passmore, P., Vakhrameeva, O. and Pronin, S. 2008. Invariance of visual perception. Experimental Psychology. 1, pp. 7-33.
Viewpoint invariance in the recognition of 3-D depth-rotated figures
Chikhman, V., Shelepin, Y., Foreman, N. and Passmore, P. 2008. Viewpoint invariance in the recognition of 3-D depth-rotated figures. Perception. 37.
The estimation of quantitative ranges of invariance in visual perception
Chikhman, V., Shelepin, Y., Vakhrameeva, O., Pronin, S., Foreman, N. and Passmore, P. 2009. The estimation of quantitative ranges of invariance in visual perception. Perception. 38.
A connectionist inference model for pattern-directed knowledge representation
Mitchell, I. and Bavan, A. 2000. A connectionist inference model for pattern-directed knowledge representation. Expert Systems. 17 (2), pp. 106-113.
Quality assurance of curricula through the use of an integrated framework for programme validation.
Mitchell, I., Sheriff, M. and Georgiadou, E. 2008. Quality assurance of curricula through the use of an integrated framework for programme validation. Tempus JEP-27178-2006, Dissemination Workshop.. Yerevan, Armenia Sep 2008
Task based visualization of 5D brain EIT data
Zhang, Y., Passmore, P. and Bayford, R. 2009. Task based visualization of 5D brain EIT data. SAC09: The 2009 ACM Symposium on Applied Computing. Honolulu Hawaii, USA 08 - 12 Mar 2009 New York Association for Computing Machinery (ACM). pp. 831-835 https://doi.org/10.1145/1529282.1529459
Selection enthusiasm.
Mitchell, I. and Agrawal, A. 2006. Selection enthusiasm. in: 6th International Conference on Simulated Evolutionand Learning, Hefei, China. Proceedings. Heidelberg Springer Verlag.
Dynamics in proportionate selection.
Mitchell, I., Agrawal, A., Litovski, I. and Passmore, P. 2005. Dynamics in proportionate selection. in: International Conference on Adaptive and Natural Computnig Alogorithms, Coimbra, Portugal. Proceedings. Vienna. Springer. pp. 226-229
Colour vision model-based approach for segmentation of traffic signs
Gao, X., Hong, K., Passmore, P., Podladchikova, L. and Shaposhnikov, D. 2008. Colour vision model-based approach for segmentation of traffic signs. EURASIP Journal on Image and Video Processing. 2008. https://doi.org/10.1155/2008/386705
MESSM: a framework for protein fold recognition using neural networks and support vector machines.
Mitchell, I., Jiang, N. and Wu, W. 2006. MESSM: a framework for protein fold recognition using neural networks and support vector machines. International Journal of Bioinformatics Research and Applications. 2 (4), pp. 381-393. https://doi.org/10.1504/IJBRA.2006.011037
Threading with environment-specific score by artificial neural networks
Mitchell, I., Jiang, N. and Wu, W. 2006. Threading with environment-specific score by artificial neural networks. Soft Computing. 10 (4), pp. 305-314. https://doi.org/10.1007/s00500-005-0488-6
Visualization and post-processing of 5D Brain Images
Zhang, Y., Passmore, P. and Bayford, R. 2005. Visualization and post-processing of 5D Brain Images. 27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. Shanghai, China 01 - 04 Sep 2005 IEEE. pp. 1083-1086 https://doi.org/10.1109/IEMBS.2005.1616607